Tracing the Actual Solution - 43.1.4 | 43. Longest common subsequence - Part B | Data Structures and Algorithms in Python
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43.1.4 - Tracing the Actual Solution

Practice

Interactive Audio Lesson

Listen to a student-teacher conversation explaining the topic in a relatable way.

Understanding the Problem of LCS

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0:00
Teacher
Teacher

Today, we're focusing on the longest common subsequence. Can anyone explain what the LCS problem entails?

Student 1
Student 1

Is it about finding the longest sequence that appears in the same order in both strings?

Teacher
Teacher

Exactly! And we derive the solution using a recursive approach, which involves checking pairs of elements. Remember, when indexed elements match, the length of the LCS increases by one.

LCS Recursive Logic

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0:00
Teacher
Teacher

If a[i] equals b[j], what do we do next in our LCS calculation?

Student 2
Student 2

We add one to the LCS from the next characters for both strings.

Teacher
Teacher

Correct! What if they don't match?

Student 3
Student 3

Then we find the max of either ignoring the current character from a or b, and add one of them for the next position?

Teacher
Teacher

Exactly! This logic helps us create a table of solutions.

Filling the LCS Table

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0:00
Teacher
Teacher

Once we understand recursive logic, how does that translate into filling our LCS table?

Student 4
Student 4

We systematically fill it by looking at our dependencies, up to three neighboring cells!

Teacher
Teacher

Right! Remember that an entry in our table depends upon its left, below, and diagonal left cells.

Tracking the Solution Path

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Teacher
Teacher

How do we backtrack to find the actual LCS from our filled table?

Student 1
Student 1

We trace back through the diagonal if we have a match and move in other directions accordingly.

Teacher
Teacher

Exactly! Each diagonal step means we found a matching character. That's key to reconstructing our subsequence.

Introduction & Overview

Read a summary of the section's main ideas. Choose from Basic, Medium, or Detailed.

Quick Overview

This section discusses how to trace the actual solution for the longest common subsequence using recursive dependencies and dynamic programming.

Standard

The section delves into the process of solving for the longest common subsequence, emphasizing the importance of dependencies in constructing the solution. It showcases how to utilize recursive logic and maintain track of matches to backtrace the sequence effectively.

Detailed

Tracing the Actual Solution

In this section, we explore the method of tracing the actual solution for finding the longest common subsequence (LCS). The LCS problem is fundamentally recursive, requiring us to analyze different cases based on whether elements in the sequences match.

When we have two indexes 'i' for sequence 'a' and 'j' for sequence 'b', if both elements match (i.e., a[i] = b[j]), the optimal substructure allows us to recognize that the length of the LCS increases by one plus the solution from the next elements (i+1, j+1). Conversely, if they don't match, we then must evaluate the best possible continuation of the sequence by considering two potential paths: incrementing either 'i' or 'j' and taking the maximum between them.

This process involves constructing a table where each entry relies on its neighboring cells β€” either from above, to the left, or diagonally above left. By systematically filling in a grid-like structure based on these relationships, we can derive the longest common subsequence dynamically.

Finally, as we record backtracking steps, we recognize that diagonal moves indicate matches, allowing us to trace back the LCS. Through carefully observing dependencies and step choices, we can accurately trace the actual solution, albeit that LCS may not be unique.

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Audio Book

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Understanding the Structure of the Problem

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This in general will take us deeper in the words. So, we said a_0 b_0 will require solved it for a_1 and b_0 or a b a_0 and b_1. So, in general we have a_i and b_j right. Again since we have a_i and b_j then you will use the same logic if a_i is equal to b_j then it is one plus the rest. So, this is the good case, if a_i is not equal to b_j then what we do is we look at the same thing, we drop b_j and solve it and symmetrically we drop a_i and solve it and take the better of the two. We take max of the solution from i and the solution from j plus 1.

Detailed Explanation

In this chunk, the text describes how to analyze a problem related to sequences, usually related to finding the Longest Common Subsequence (LCS). It discusses how to handle the cases when the elements at particular indices of two sequences match or do not match. When they do match (a_i == b_j), it means we have found a common element, and we can count it by adding 1 to the result of the remaining elements. If they do not match, we have two options: drop the element from one sequence or the other, and we choose the solution that yields the maximum count of common sequences, adding 1 only when there is a match.

Examples & Analogies

Think about trying to find common interests in two different lists of hobbies. If both lists show the same hobby (like 'hiking'), you can count that as a match. If one list has 'hiking' and the other has 'swimming', you can consider both options by either ignoring 'hiking' from the first list or 'swimming' from the second list, comparing what you have left to find out how many hobbies are shared.

Handling Complex Dependencies in Sequences

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So, here the dependency is slightly more complicated because depending on the case, I either have to look at i plus 1 j plus 1 or I have to look at i plus 1 j or i j plus 1. So, I had for this square, I had looked at its right neighbor, right diagonal neighbor and the bottom neighbor, but once again the ones which have no dependency appear.

Detailed Explanation

This chunk discusses the complexity that comes with determining the dependencies between different parts of the sequences being analyzed. It explains that depending on whether the elements match or not, the algorithm has to check values from three different positions: directly diagonal (i+1, j+1), straight down (i+1, j), and straight right (i, j+1). This reflects how subproblems can grow or shrink based on earlier decisions, emphasizing the need to manage these dependencies appropriately.

Examples & Analogies

Consider a family tree when analyzing relationships. When looking for how many generations you share with another family, you don’t just look for one ancestor. You might have to check various branches – like your grandparents on one side or your great-grandparents on another – to determine how closely you are related, reflecting the dependencies between different familial relationships.

Filling Up the Grid

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Now, once we have this we can fill up this part right and then again we can have two and three c entries we can fill up this. We have three entries we can fill up this, we have three entries we can fill up this and we can fill up this column and we can do this column by column and we propagate it and then finally, the value that propagates here is our longest length of the longest common subsequences.

Detailed Explanation

In this chunk, the text emphasizes how to systematically fill in a grid that represents the relationships between elements of two sequences. The idea is to start from a base case (often a '0' indicating a lack of commonality) and gradually build up values based on the decisions made at each previous step. This iterative filling of data allows us to ultimately arrive at the solution for the longest common subsequence, represented at the bottom right of the grid.

Examples & Analogies

Think of it like assembling a large puzzle piece. You start with the corner pieces where you have a clear base (the 0s), then you work your way across the board filling in gaps piece by piece until the entire picture (or solution of how the elements relate) is complete. The more pieces you place correctly, the clearer the overall image becomes.

Tracing Back the Actual Matches

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Now, how do we trace out the actual solution when the solution grows, whenever we increment the number? So, we can ask why is this 4? So, we say that this is 4 not because we did plus 3 because s is not equal to b, we did 4 because we got the max value from here.

Detailed Explanation

This chunk talks about how to trace back through the grid once it has been filled in order to find the actual sequence of matches that comprise the longest common subsequence. It involves backtracking from the end of the populated grid to identify precisely which decisions led to the maximum value in the context of matches or drops. The path taken during this tracing can include repeating elements or diverging paths, reflecting multiple solutions.

Examples & Analogies

It’s similar to retracing your steps in a maze to determine how you arrived at the exit. Each choice you made along the way represents a potential match or mismatch on your path back, and by following the correct route, you can identify the specific elements (or turns) that led you to your final destination.

General Algorithm for Longest Common Subsequence

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So, here is the python code is not very different from the earlier one. We can just see we have just initialize the last row and the bottom row on the last column and then as before you walk up row by row, column by column and filling using the equation.

Detailed Explanation

In this chunk, the focus is on understanding the algorithm's implementation in Python. It mentions how the algorithm initializes certain positions (the last row and column) and then populates the rest of the grid according to the established rules derived from the LCS problem logic. This allows students to see the practical application of the theoretical ideas discussed in previous chunks.

Examples & Analogies

Think of writing up a recipe where you start by gathering your ingredients in order – much like initializing your grid. Then, as you follow the recipe step-by-step, you fill in the details for your dish, just like populating the grid cells based on the logic of matches and drops.

Definitions & Key Concepts

Learn essential terms and foundational ideas that form the basis of the topic.

Key Concepts

  • LCS Definition: It is the longest sequence that can be derived from both sequences while maintaining order.

  • Recursive Approach: It involves breaking the problem down by checking character matches between the two sequences.

  • Dynamic Programming Grid: This concept allows solving LCS by systematically filling in a grid based on previously computed values.

  • Backtracking: A method used to follow the path through the grid to reconstruct the actual longest common subsequence.

Examples & Real-Life Applications

See how the concepts apply in real-world scenarios to understand their practical implications.

Examples

  • For sequences 'ABCBDAB' and 'BDCAB', the LCS is 'BCAB'.

  • Given the sequences 'AGGTAB' and 'GXTXAYB', the LCS is 'GTAB'.

Memory Aids

Use mnemonics, acronyms, or visual cues to help remember key information more easily.

🎡 Rhymes Time

  • Match and track, step by step, through sequences gap, LCS is a clever rep!

πŸ“– Fascinating Stories

  • Imagine two friends, Alex and Bella, searching for treasured notes aligned perfectly; each letter they match means they've found a gem in their friendshipβ€”the longer the string of matches, the stronger their bond!

🧠 Other Memory Gems

  • The acronym 'MATCH' can help you remember: M - Match; A - Add; T - Take max; C - Calculate; H - History, as you trace back through the grid.

🎯 Super Acronyms

Use 'LCS'β€”Long Sequences Connect, to remember that LCS connects sequences through matches.

Flash Cards

Review key concepts with flashcards.

Glossary of Terms

Review the Definitions for terms.

  • Term: Longest Common Subsequence (LCS)

    Definition:

    The longest subsequence present in both strings, maintaining the order of characters.

  • Term: Dynamic Programming

    Definition:

    An algorithmic paradigm that solves complex problems by breaking them down into simpler subproblems.

  • Term: Recursion

    Definition:

    A method where the solution of a problem depends on solutions to smaller instances of the same problem.

  • Term: Dependencies

    Definition:

    The relationships that dictate how current calculations rely on earlier computations.